load.bs.genome: Loads (or downloads) the required BSGenome package
In pmoulos/metaseqR: An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms.
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/metaseqr.annotation.R
Description
Retrieves the required BSgenome package when the
annotation source is "ucsc" or
"refseq". These packages are required in order
to estimate the GC-content of the retrieved genes from
UCSC or RefSeq.
Usage
1
load.bs.genome(org)
Arguments
org
one of metaseqr supported
organisms.
Value
A proper BSgenome package name.
Author(s)
Panagiotis Moulos
Examples
1
bs.obj <- load.bs.genome("mm9")
pmoulos/metaseqR documentation built on Dec. 21, 2020, 6:19 a.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/metaseqr.annotation.R
Description
Retrieves the required BSgenome package when the
annotation source is "ucsc" or
"refseq". These packages are required in order
to estimate the GC-content of the retrieved genes from
UCSC or RefSeq.
Usage
1 | load.bs.genome(org)
|
Arguments
org |
one of |
Value
A proper BSgenome package name.
Author(s)
Panagiotis Moulos
Examples
1 | bs.obj <- load.bs.genome("mm9")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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