README.md

In pkrog/biodbExpasy: biodbExpasy, a library for connecting to Expasy ENZYME database.

biodbExpasy

An R package for accessing Expasy ENZYME database, based on R package/framework biodb.

Introduction

This package is an extension of biodb that implements a connector to Expasy ENZYME database.

Installation

Install the latest version of this package by running the following commands:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install('biodbExpasy')

Examples

To instantiate a connector to Expasy ENZYME database., run:

mybiodb <- biodb::newInst()
conn <- mybiodb$getFactory()$createConn('expasy.enzyme')
mybiodb$terminate()

Documentation

To get documentation on the implemented connector, run the following command in R:

?biodbExpasy::ExpasyEnzymeConn

Citations

https://enzyme.expasy.org

• Bairoch A. The ENZYME database in 2000. Nucleic Acids Res 28:304-305(2000), https://enzyme.expasy.org/data/enz00.pdf.

pkrog/biodbExpasy documentation built on March 29, 2022, 9:52 a.m.