inst/cheng-diabetes/preprocess.r
In perishky/meffonym: DNA methylation exposure and phenotypic archive
## Cheng diabetes cox lasso (145 CpG sites)
#https://static-content.springer.com/esm/art%3A10.1038%2Fs43587-023-00391-4/MediaObjects/43587_2023_391_MOESM3_ESM.xlsx
cheng <- read.csv("43587_2023_391_MOESM3_ESM.csv", skip = 2) # supplementary table 5
cheng <- cheng[,c("Name","Beta")]
colnames(cheng) <- c("pred.var","coef")
write.csv(cheng, file="coefs.csv", row.names=F)
perishky/meffonym documentation built on Nov. 8, 2024, 8:36 p.m.
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## Cheng diabetes cox lasso (145 CpG sites)
#https://static-content.springer.com/esm/art%3A10.1038%2Fs43587-023-00391-4/MediaObjects/43587_2023_391_MOESM3_ESM.xlsx
cheng <- read.csv("43587_2023_391_MOESM3_ESM.csv", skip = 2) # supplementary table 5
cheng <- cheng[,c("Name","Beta")]
colnames(cheng) <- c("pred.var","coef")
write.csv(cheng, file="coefs.csv", row.names=F)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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