Files in openanalytics/ganalyse
Easy Analysis of RNASeq DE
DESCRIPTION
NAMESPACE
NEWS
R/contrasts.R
R/density-plot.R
R/design.R
R/dgelist.R
R/esets-map.R
R/esets.R
R/fpkm-dge.R
R/ganalyse.R
R/gather-counts.R
R/onAttach.R
R/onLoad.R
R/raw-dge.R
R/rnaseq.R
R/show-counts.R
R/test-ganalyse.R
R/volcano-plot.R
inst/tests/fpkm/annotation.txt
inst/tests/fpkm/control-1.genes.fpkm_tracking
inst/tests/fpkm/control-2.genes.fpkm_tracking
inst/tests/fpkm/control-3.genes.fpkm_tracking
inst/tests/fpkm/error-1.txt
inst/tests/fpkm/error-2.txt
inst/tests/fpkm/treatA-1.genes.fpkm_tracking
inst/tests/fpkm/treatA-2.genes.fpkm_tracking
inst/tests/fpkm/treatA-3.genes.fpkm_tracking
inst/tests/fpkm/treatB-1.genes.fpkm_tracking
inst/tests/fpkm/treatB-2.genes.fpkm_tracking
inst/tests/fpkm/treatB-3.genes.fpkm_tracking
inst/tests/raw/annotation.txt
inst/tests/raw/control-1.tsv
inst/tests/raw/control-2.tsv
inst/tests/raw/control-3.tsv
inst/tests/raw/error-1.txt
inst/tests/raw/error-2.txt
inst/tests/raw/treatA-1.tsv
inst/tests/raw/treatA-2.tsv
inst/tests/raw/treatA-3.tsv
inst/tests/raw/treatB-1.tsv
inst/tests/raw/treatB-2.tsv
inst/tests/raw/treatB-3.tsv
inst/tests/tests.Rraw
man/as.dgelist.Rd
man/as.eset.Rd
man/as.eset_map.Rd
man/construct_contrasts.Rd
man/construct_design.Rd
man/density_plot.Rd
man/edger_dge.Rd
man/ganalyse.Rd
man/gather_counts.Rd
man/limma_dge.Rd
man/rnaseq.Rd
man/show_counts.Rd
man/test_ganalyse.Rd
man/volcano_plot.Rd
man/write_dge.Rd
tests/tests.R
vignettes/css/bootstrap.css
vignettes/example/fpkm/annotation.txt
vignettes/example/fpkm/control-1.genes.fpkm_tracking
vignettes/example/fpkm/control-2.genes.fpkm_tracking
vignettes/example/fpkm/control-3.genes.fpkm_tracking
vignettes/example/fpkm/treatA-1.genes.fpkm_tracking
vignettes/example/fpkm/treatA-2.genes.fpkm_tracking
vignettes/example/fpkm/treatA-3.genes.fpkm_tracking
vignettes/example/fpkm/treatB-1.genes.fpkm_tracking
vignettes/example/fpkm/treatB-2.genes.fpkm_tracking
vignettes/example/fpkm/treatB-3.genes.fpkm_tracking
vignettes/example/raw/annotation.txt
vignettes/example/raw/control-1.tsv
vignettes/example/raw/control-2.tsv
vignettes/example/raw/control-3.tsv
vignettes/example/raw/treatA-1.tsv
vignettes/example/raw/treatA-2.tsv
vignettes/example/raw/treatA-3.tsv
vignettes/example/raw/treatB-1.tsv
vignettes/example/raw/treatB-2.tsv
vignettes/example/raw/treatB-3.tsv
vignettes/ganalyse-vignette.Rmd
