SPADE.installPlugin: Install CytoSPADE Cytoscape plugin
In nolanlab/spade: SPADE -- An analysis and visualization tool for Flow Cytometry
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
Install, CytoSPADE, the Cytoscape plugin for working with SPADE that is distributed with the SPADE R package. CytSPADE provides a GUI for setting-up SPADE analyses and interactively visualizing the results.
Usage
1
SPADE.installPlugin(cytoscape_path)
Arguments
cytoscape_path
Path to your Cytoscape install. For example, on OSX it is typically something like '/Applications/Cytoscape_v2.8.3'
Details
Copies the Cytoscape plugin file distributed with the SPADE R package to the Cytoscape plugin directory.
Value
Logical indicating success of the copy operation.
Author(s)
Michael Linderman
Examples
1
2
# On OSX:
# SPADE.installPlugin("/Applications/Cytoscape_v2.8.3/")
nolanlab/spade documentation built on May 23, 2019, 9:32 p.m.
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Description Usage Arguments Details Value Author(s) Examples
Description
Install, CytoSPADE, the Cytoscape plugin for working with SPADE that is distributed with the SPADE R package. CytSPADE provides a GUI for setting-up SPADE analyses and interactively visualizing the results.
Usage
1 | SPADE.installPlugin(cytoscape_path)
|
Arguments
cytoscape_path |
Path to your Cytoscape install. For example, on OSX it is typically something like '/Applications/Cytoscape_v2.8.3' |
Details
Copies the Cytoscape plugin file distributed with the SPADE R package to the Cytoscape plugin directory.
Value
Logical indicating success of the copy operation.
Author(s)
Michael Linderman
Examples
1 2 | # On OSX:
# SPADE.installPlugin("/Applications/Cytoscape_v2.8.3/")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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