alpacaMetaNetwork: Create alpacaMetaNetwork for Louvain optimization

In netZoo/netZooR: Unified methods for the inference and analysis of gene regulatory networks

Create alpacaMetaNetwork for Louvain optimization

Description

Computes the "effective" adjacency matrix of a alpacaMetaNetwork whose nodes represent communities in the larger input matrix.

Usage

alpacaMetaNetwork(J, S)

Arguments

J	The modularity matrix
S	The community membership vector from the previous round of agglomeration.

Value

The differential modularity matrix, with rows representing "from" nodes and columns representing "to" nodes.

Examples

a <- 1 # example place holder

netZoo/netZooR documentation built on Oct. 16, 2024, 10:23 p.m.