plotHeatmapMeta: Plot a Meta-region plot from heatmaps
In mgperry/heatmaps: Flexible Heatmaps for Functional Genomics and Sequence Features
Description
Usage
Arguments
Value
Examples
Description
Plot a Meta-region plot from heatmaps
Usage
1
2
plotHeatmapMeta(hm_list, binsize = 1, colors = gg_col(length(hm_list)),
addReferenceLine = FALSE)
Arguments
hm_list
A list of heatmaps
binsize
Integer, size of bins to use in plot
colors
Color to use for each heatmap
addReferenceLine
Logical, add reference line at zero or not
This function creates a meta-region plot from 1 or more heatmaps with the same
coordinates. A meta-region plot graphs the sum of the signal at each position in
each heatmap rather than visualising the signal in two dimensions. Often binning
is required to smooth noisy signal.
Value
invisible(0)
Examples
1
2
data(HeatmapExamples)
plotHeatmapMeta(hm, color="steelblue")
mgperry/heatmaps documentation built on May 22, 2019, 8:53 p.m.
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Description Usage Arguments Value Examples
Description
Plot a Meta-region plot from heatmaps
Usage
1 2 | plotHeatmapMeta(hm_list, binsize = 1, colors = gg_col(length(hm_list)),
addReferenceLine = FALSE)
|
Arguments
hm_list |
A list of heatmaps |
binsize |
Integer, size of bins to use in plot |
colors |
Color to use for each heatmap |
addReferenceLine |
Logical, add reference line at zero or not This function creates a meta-region plot from 1 or more heatmaps with the same coordinates. A meta-region plot graphs the sum of the signal at each position in each heatmap rather than visualising the signal in two dimensions. Often binning is required to smooth noisy signal. |
Value
invisible(0)
Examples
1 2 | data(HeatmapExamples)
plotHeatmapMeta(hm, color="steelblue")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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