Files in mensxmachina/BioDataome
Functions used to preprocess datasets stored in BioDataome
.Rbuildignore
.gitignore
BioDataome.Rproj
DESCRIPTION
NAMESPACE
NEWS.md
R/DOLevelsUniques.Rda
R/GSEmetadata.R
R/GSEtoDisease.R
R/GSEtoDiseaseGEO.R
R/compareDsetList.R
R/compareDsets.R
R/controlSamples.R
R/curateGSE.R
R/curateRecountRNASeq.R
R/diseasetoChildrenNodes.R
R/diseasetoParentNodes.R
R/downloadPhenotype.R
R/downloadPhenotypePlatform.R
R/downloadRaw.R
R/downloadRecount.R
R/entrezIDtoGSE.R
R/preprocessGEO.R
R/preprocessGEOMethylation.R
R/recountIDtoGSE.R
R/sysdata.rda
README.md
man/GSEmetadata.Rd
man/GSEtoDisease.Rd
man/GSEtoDiseaseGEO.Rd
man/compareDsetList.Rd
man/compareDsets.Rd
man/controlSamples.Rd
man/curateGSE.Rd
man/curateRecountRNASeq.Rd
man/diseasetoChildrenNodes.Rd
man/diseasetoParentNodes.Rd
man/downloadPhenotype.Rd
man/downloadPhenotypePlatform.Rd
man/downloadRaw.Rd
man/downloadRecount.Rd
man/entrezIDtoGSE.Rd
man/preprocessGEO.Rd
man/preprocessGEOMethylation.Rd
man/recountIDtoGSE.Rd
vignettes/BioDataome-vignette.R
vignettes/BioDataome-vignette.Rmd
vignettes/BioDataome-vignette.html
vignettes/BioDataome-vignette_files/figure-html/unnamed-chunk-10-1.png
vignettes/BioDataome-vignette_files/figure-html/unnamed-chunk-12-1.png
vignettes/BioDataome-vignette_files/figure-html/unnamed-chunk-16-1.png
vignettes/BioDataome-vignette_files/figure-html/unnamed-chunk-9-1.png
vignettes/BioDataome-vignette_files/figure-html/unnamed-chunk-9-2.png
vignettes/BioDataome-vignette_files/figure-html/unnamed-chunk-9-3.png
vignettes/GSE10026/GSM252165.CEL.gz
vignettes/GSE10026/GSM252166.CEL.gz
vignettes/GSE10026/GSM252167.CEL.gz
vignettes/GSE10026/GSM252168.CEL.gz
vignettes/GSE10026/GSM252169.CEL.gz
vignettes/GSE10026/GSM252170.CEL.gz
vignettes/GSE10026/GSM252171.CEL.gz
vignettes/GSE10026/GSM252172.CEL.gz
vignettes/GSE10026/GSM252173.CEL.gz
vignettes/GSE10026/filelist.txt
vignettes/SRP032775/rse_gene.Rdata
vignettes/SRP050971/rse_gene.Rdata
