annotate_mouse_genes: Annotate with genes
In matmu/mmus: In-silico methods for genetic finemapping in inbred mice
annotate_mouse_genes R Documentation
Annotate with genes
Description
Request mouse genes from Ensembl Biomart.
Usage
annotate_mouse_genes(geno, flanking = NULL)
Arguments
geno
Data frame or GenomicRanges::GRanges object including columns
chr, pos.
flanking
Size of flanking sequence to be included.
Value
Data frame.
Examples
geno = finemap("chr1",
start = 5000000, end = 6000000,
strain1 = c("C57BL_6J"), strain2 = c("AKR_J", "A_J", "BALB_cJ")
)
genes = annotate_mouse_genes(geno, 50000)
matmu/mmus documentation built on Sept. 4, 2024, 9:08 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| annotate_mouse_genes | R Documentation |
Annotate with genes
Description
Request mouse genes from Ensembl Biomart.
Usage
annotate_mouse_genes(geno, flanking = NULL)
Arguments
geno |
Data frame or GenomicRanges::GRanges object including columns chr, pos. |
flanking |
Size of flanking sequence to be included. |
Value
Data frame.
Examples
geno = finemap("chr1",
start = 5000000, end = 6000000,
strain1 = c("C57BL_6J"), strain2 = c("AKR_J", "A_J", "BALB_cJ")
)
genes = annotate_mouse_genes(geno, 50000)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.