getSignificantFunctions: Calculate significant function per intpair module
In martaint/InterCellar: InterCellar: an R-Shiny app for interactive analysis and exploration of cell-cell communication in single-cell transcriptomics
View source: R/fct_int_pair_modules.R
getSignificantFunctions R Documentation
Calculate significant function per intpair module
Description
Calculate significant function per intpair module
Usage
getSignificantFunctions(
subGenePairs_func_mat,
gpModules_assign,
rank.terms,
input_maxPval
)
Arguments
subGenePairs_func_mat
subset of binary mat
gpModules_assign
assignment of intpairs to modules
rank.terms
table of ranked functions
input_maxPval
threshold of significance
Value
table with significant functions
martaint/InterCellar documentation built on April 7, 2022, 11:44 a.m.
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View source: R/fct_int_pair_modules.R
| getSignificantFunctions | R Documentation |
Calculate significant function per intpair module
Description
Calculate significant function per intpair module
Usage
getSignificantFunctions( subGenePairs_func_mat, gpModules_assign, rank.terms, input_maxPval )
Arguments
subGenePairs_func_mat |
subset of binary mat |
gpModules_assign |
assignment of intpairs to modules |
rank.terms |
table of ranked functions |
input_maxPval |
threshold of significance |
Value
table with significant functions
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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