dot-plotRecapture: Plots capture-recapture
In malhamdoosh/abseqR: Reporting and data analysis functionalities for Rep-Seq datasets of antibody libraries
Description
Usage
Arguments
Value
Description
Plots the percent of recapture clonotypes (on the y-axis)
drawn from a repeated (with replacement) sample size on the x axis. The
percentage of recaptured clonotypes is averaged over 5 recapture rounds.
Usage
1
.plotRecapture(files, sampleNames, regions = c("CDR3", "V"))
Arguments
files
list type. List of _cdr_v_recapture.csv.gz files.
sampleNames
vector type. A vector of strings each
representing the name of samples in files.
regions
vector type. A vector of strings,
regions to be included in the plot. defaults to c("CDR3", "V")
Value
ggplot2 object
malhamdoosh/abseqR documentation built on May 24, 2019, 12:36 a.m.
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Description Usage Arguments Value
Description
Plots the percent of recapture clonotypes (on the y-axis) drawn from a repeated (with replacement) sample size on the x axis. The percentage of recaptured clonotypes is averaged over 5 recapture rounds.
Usage
1 | .plotRecapture(files, sampleNames, regions = c("CDR3", "V"))
|
Arguments
files |
list type. List of _cdr_v_recapture.csv.gz files. |
sampleNames |
vector type. A vector of strings each representing the name of samples in files. |
regions |
vector type. A vector of strings, regions to be included in the plot. defaults to c("CDR3", "V") |
Value
ggplot2 object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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