R/TMT16.R

In lgatto/MSnbase: Base Functions and Classes for Mass Spectrometry and Proteomics

TMT16 <- TMT16HCD <-
    new("ReporterIons",
        description = "16-plex TMT HCD",
        name = "TMT16HCD",
        reporterNames = c("126", "127N",
                          "127C", "128N", "128C", "129N",
                          "129C", "130N", "130C", "131N",
                          "131C", "132N", "132C", "133N",
                          "133C", "134N"),
        mz = c(126.127726, ## 126
               127.124761, ## 127N
               127.131081, ## 127C
               128.128116, ## 128N
               128.134436, ## 128C
               129.131471, ## 129N
               129.13779,  ## 129C
               130.134825, ## 130N
               130.141145, ## 130C 
               131.13818,  ## 131N
               131.1445,   ## 131C
               132.141535, ## 132N
               132.147855, ## 132C
               133.14489,  ## 133N
               133.15121,  ## 133C
               134.148245  ## 134N
        ),
        col = c("#E55400", "#E28100", "#DFAC00","#DDD700", "#B5DA00", "#87D8000",
                "#5BD500", "#30D300", "#05D000","#00CE23", "#00CB4B", "#00C972",
                "#00C699", "#00C4BE", "#00A0C1","#0078BF"),
        width = 0.002)