SGVariantCounts: Splice graph variant counts
In ldg21/SGSeq: Splice event prediction and quantification from RNA-seq data
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Creates an instance of S4 class SGVariantCounts for storing
splice variant counts.
Usage
1
Arguments
x
RangedSummarizedExperiment with SGVariants
as rowRanges and assays “variantFreq”,
“countsVariant5p”, “countsVariant3p”,
“countsEvent5p”, “countsEvent3p”, and
optionally “countsVariant5pOr3p”
Value
SGVariantCounts object
Author(s)
Leonard Goldstein
Examples
1
sgvc <- SGVariantCounts()
ldg21/SGSeq documentation built on Oct. 14, 2020, 9:51 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Creates an instance of S4 class SGVariantCounts for storing
splice variant counts.
Usage
1 |
Arguments
x |
|
Value
SGVariantCounts object
Author(s)
Leonard Goldstein
Examples
1 | sgvc <- SGVariantCounts()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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