extractCoverageForPositions: Get Coverage at Positions
In lawremi/VariantTools: Tools for Exploratory Analysis of Variant Calls
View source: R/sampleSpecific.R
extractCoverageForPositions R Documentation
Get Coverage at Positions
Description
Gets values from an RleList corresponding to positions (width 1
ranges) in a GRanges (or VRanges). The result is a
simple atomic vector.
Usage
extractCoverageForPositions(cov, pos)
Arguments
cov
An RleList like that returned by coverage.
pos
A GRanges consisting only of width-1 ranges.
Value
Atomic vector with one value from cov per position in pos.
Author(s)
Michael Lawrence
lawremi/VariantTools documentation built on March 4, 2024, 11:54 a.m.
R Package Documentation
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View source: R/sampleSpecific.R
| extractCoverageForPositions | R Documentation |
Get Coverage at Positions
Description
Gets values from an RleList corresponding to positions (width 1
ranges) in a GRanges (or VRanges). The result is a
simple atomic vector.
Usage
extractCoverageForPositions(cov, pos)
Arguments
cov |
An |
pos |
A |
Value
Atomic vector with one value from cov per position in pos.
Author(s)
Michael Lawrence
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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