get_coordinate_modifier: Get or set coordinate modifiers for the query.

In langmead-lab/snapr: R/Bioconductor Package for interfacing with Snaptron for rapid querying of expression counts

Get or set coordinate modifiers for the query.

Description

Get or set coordinate modifiers for the query.

Usage

get_coordinate_modifier(qb)

set_coordinate_modifier(qb, coordinate_modifier)

Arguments

qb	a QueryBuilder object constructed using the QueryBuilder function.
coordinate_modifier	any of the variants of the Coordinates enum.

Value

get_coordinate_modifier returns the current coodinate modifier as a string. set_coordinate_modifier returns a new QueryBuilder object with the coordinate modifier set to the value of coordinate_modifier.

Examples

qb <- QueryBuilder(compilation = "gtex", regions = "CD99")
qb <- set_coordinate_modifier(qb, Coordinates$Within)
get_coordinate_modifier(qb)

langmead-lab/snapr documentation built on May 4, 2022, 7:41 p.m.