parse_uploaded_file: parse uploaded file

In lagelab/Genoppi: genoppi

parse uploaded file

Description

the following actions are performed sequentially 1) call read_input to get the file, 2) check whether accession_number column is present, and if so, map to gene id; 3) calculate moderated t-test on the data

Usage

parse_uploaded_file(path)

Arguments

path	a string, data path

Value

a data.frame ready for further analysis in genoppi

Note

this is for sequential parsing of files in the multiple file tab in shiny.

See Also

Other shiny: add_plotly_markers_search_pathway(), add_plotly_markers_search(), calc_logfc_limit(), get_replicate_summary_text()

lagelab/Genoppi documentation built on Oct. 13, 2022, 2:36 p.m.