README.md

CardinalVis

Shiny interface for Cardinal

Install by running the following in R:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

if (!requireNamespace("remotes", quietly = TRUE))
    install.packages("remotes")

BiocManager::install("kuwisdelu/CardinalVis")

Get started with an example dataset by running:

if (!requireNamespace("CardinalWorkflows", quietly = TRUE))
    BiocManager::install("CardinalWorkflows")

library(CardinalVis)

data(pig206, package="CardinalWorkflows")
pig206 <- as(pig206, "MSImagingExperiment")

msiVis(pig206)


kuwisdelu/CardinalVis documentation built on June 2, 2019, 9:07 p.m.