filter_eval: filter_eval

In kullrich/CRBHits: Conditional reciprocal best hits (CRBHits) in R

filter_eval

Description

This function filters BLAST-like tabular output according to evalue.

Usage

filter_eval(rbh, eval = 0.001, inverse = FALSE)

Arguments

rbh	BLAST-like tabular matrix [mandatory]
eval	evalue [default: 1e-3]
inverse	specify if filter should keep the removed values [default: FALSE]

Value

rbh matrix

Author(s)

Kristian K Ullrich

Examples

## load crbh data
data(ath_aly_crbh)
dim(ath_aly_crbh$crbh1)
dim(filter_eval(
    rbh=ath_aly_crbh$crbh1,
    eval=1e-100))

kullrich/CRBHits documentation built on March 29, 2024, 11:34 a.m.