OmicSelector_merge_formulas: OmicSelector_merge_formulas

In kstawiski/OmicSelector: OmicSelector - a package for biomarker selection based on high-throughput experiments.

OmicSelector_merge_formulas

Description

Merge and filter formulas. This function can be used to merge the formulas*.RDS created by different runs of 'OmicSelector_OmicSelector()' and filter them to keep the maximum number of miRNAs. This may be useful in planning qPCR validation. The result of this function is 'featureselection_formulas_final.RDS' file, which can be futher supplied to 'OmicSelector_benchmark()'.

Usage

OmicSelector_merge_formulas(wd = getwd(), max_miRNAs = 11, add = list())

Arguments

wd	Working directory with formulas*.RDS files.
max_miRNAs	Maximum number of miRNAs to be selected in formulas.
add	List of additional sets that should be added to the formulas.

Value

Final formulas object, also save as 'featureselection_formulas_final.RDS' in working directory.

kstawiski/OmicSelector documentation built on April 10, 2024, 11:11 p.m.