inst/extdata/objects.R
In jokergoo/rGREAT: GREAT Analysis - Functional Enrichment on Genomic Regions
library(rGREAT)
set.seed(123)
gr = randomRegions(nr = 1000, genome = "hg19")
job = submitGreatJob(gr)
tbl = getEnrichmentTables(job)
plotRegionGeneAssociations(job)
getRegionGeneAssociations(job)
plotRegionGeneAssociations(job, ontology = "GO Molecular Function",
term_id = "GO:0004984")
getRegionGeneAssociations(job, ontology = "GO Molecular Function",
term_id = "GO:0004984")
saveRDS(job, file = "~/project/development/rGREAT/inst/extdata/GreatJob.rds", compress = "xz")
jokergoo/rGREAT documentation built on March 28, 2024, 5:31 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
library(rGREAT)
set.seed(123)
gr = randomRegions(nr = 1000, genome = "hg19")
job = submitGreatJob(gr)
tbl = getEnrichmentTables(job)
plotRegionGeneAssociations(job)
getRegionGeneAssociations(job)
plotRegionGeneAssociations(job, ontology = "GO Molecular Function",
term_id = "GO:0004984")
getRegionGeneAssociations(job, ontology = "GO Molecular Function",
term_id = "GO:0004984")
saveRDS(job, file = "~/project/development/rGREAT/inst/extdata/GreatJob.rds", compress = "xz")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.