getBaseProfile: Compute and plot nucleotide profile.
In jmacdon/oligo: Preprocessing tools for oligonucleotide arrays
Description
Usage
Arguments
Value
View source: R/utils-general.R
Description
Computes and, optionally, lots nucleotide profile, describing the sequence effect on intensities.
Usage
1
getBaseProfile(coefs, probeLength = 25, plot = FALSE, ...)
Arguments
coefs
affinity spline coefficients.
probeLength
length of probes
plot
logical. Plots profile?
...
arguments to be passed to matplot.
Value
Invisibly returns a matrix with estimated effects.
jmacdon/oligo documentation built on Aug. 11, 2020, 12:32 a.m.
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Description Usage Arguments Value
View source: R/utils-general.R
Description
Computes and, optionally, lots nucleotide profile, describing the sequence effect on intensities.
Usage
1 | getBaseProfile(coefs, probeLength = 25, plot = FALSE, ...)
|
Arguments
coefs |
affinity spline coefficients. |
probeLength |
length of probes |
plot |
logical. Plots profile? |
... |
arguments to be passed to matplot. |
Value
Invisibly returns a matrix with estimated effects.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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