microRNAs: Extract microRNA or tRNA genomic ranges from an object

In jmacdon/GenomicFeatures: Conveniently import and query gene models

Description

Generic functions to extract microRNA or tRNA genomic ranges from an object. This page documents the methods for TxDb objects only.

Usage

microRNAs(x)
## S4 method for signature 'TxDb'
microRNAs(x)

tRNAs(x)
## S4 method for signature 'TxDb'
tRNAs(x)

Arguments

x	A TxDb object.

Value

A GRanges object.

Author(s)

M. Carlson

See Also

• transcripts, transcriptsBy, and transcriptsByOverlaps for the core genomic features extractors.

• The TxDb class.

Examples

## Not run: library(TxDb.Hsapiens.UCSC.hg19.knownGene)
library(mirbase.db)
microRNAs(TxDb.Hsapiens.UCSC.hg19.knownGene)

## End(Not run)

jmacdon/GenomicFeatures documentation built on Jan. 2, 2022, 7:40 a.m.