profile2bedGraph: A wrapper function to compute MNase accessibility (MACC)...
In jakubmie/MACC: MNase accesibility (MACC) scores.
Description
Usage
Arguments
Examples
Description
A wrapper function to compute MNase accessibility (MACC) scores with one command.
Usage
1
profile2bedGraph(tab, path = "./", fname = "profile", nn = 4)
Arguments
tab
a matrix with four columns corresponding to chromosome names, start of the bins, end of the bins and interesting values respectively.
fname
a character string giving the name of the file to be created.
nn
integer indicating the number of decimal places to be used.
path2files
a character string giving the name of directory where the new file will be saved.
Examples
1
jakubmie/MACC documentation built on May 18, 2019, 11:17 a.m.
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Description Usage Arguments Examples
Description
A wrapper function to compute MNase accessibility (MACC) scores with one command.
Usage
1 | profile2bedGraph(tab, path = "./", fname = "profile", nn = 4)
|
Arguments
tab |
a matrix with four columns corresponding to chromosome names, start of the bins, end of the bins and interesting values respectively. |
fname |
a character string giving the name of the file to be created. |
nn |
integer indicating the number of decimal places to be used. |
path2files |
a character string giving the name of directory where the new file will be saved. |
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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