make.DeponsDyn: Make DeponsDyn object from data stored in data frame

In jacobnabe/DEPONS2R: Read, Plot and Analyse Output from the DEPONS Model

Make DeponsDyn object from data stored in data frame

Description

Function for reading converting a data frame containing DEPONS simulation output to a DeponsDyn object.

Usage

make.DeponsDyn(
  oname,
  title = "NA",
  landscape = "NA",
  simtime = "NA",
  startday = "2000-01-01",
  timestep = 30,
  tz = "GMT"
)

Arguments

oname	Name of the object (data frame) that contains number of animals for each time step during the simulation, along with their energy and the amount of food in the landscape.
title	Optional character string giving name of simulation
landscape	The landscape used in the simulation
simtime	Optional character string with the date and time when the simulation finished (format yyyy-mm-dd).
startday	The start of the period that the simulation represents, i.e. the real-world equivalent of 'tick 1' (character string of the form 'yyyy-mm-dd', or POSIXlt). Defaluts to 2000-01-01
timestep	Time step used in the model, in minutes. Defaults to 30 minutes in DEPONS.
tz	Time zone.

Value

DeponsDyn object containing simulation output

See Also

See DeponsDyn-class for details on what is stored in the output object.

Examples

data(porpoisedyn)
the.data <- as.data.frame(porpoisedyn)
the.data <- the.data[, c(1:4)]
names(the.data) <- c("tick", "PorpoiseCount", "FoodEnergyLevel", "PorpoiseEnergyLevel")
porpoisedyn2 <- make.DeponsDyn(the.data, startday="2010-01-01")
porpoisedyn2

jacobnabe/DEPONS2R documentation built on Nov. 20, 2024, 10:22 p.m.