id_conversion_TCGA: Convert ENSEMBL gene id to gene Symbol in TCGA

In huerqiang/GeoTcgaData: Processing Various Types of Data on GEO and TCGA

Convert ENSEMBL gene id to gene Symbol in TCGA

Description

Convert ENSEMBL gene id to gene Symbol in TCGA

Usage

id_conversion_TCGA(profiles, toType = "SYMBOL")

Arguments

profiles	a data.frame of gene expression data, each column is a sample, and each row is a gene.
toType	one of 'keytypes(org.Hs.eg.db)'

Value

a data.frame, gene symbols and their expression value

Examples

library(org.Hs.eg.db)
data(profile)
result <- id_conversion_TCGA(profile)

huerqiang/GeoTcgaData documentation built on March 21, 2024, 1:42 a.m.