raw.om: Example of MSstatsTMT report from OpenMS for TMT-10plex...
In huang704/MSstatsTMT: Protein Significance Analysis in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling
Description
Usage
Format
Details
Examples
Description
Example of MSstatsTMT PSM sheet from MaxQuant.
It is the input for OpenMStoMSstatsTMTFormat function.
It includes peak intensities for 10 proteins among 27 MS runs from three TMT10 mixtures.
The important variables are as follows:
Usage
1
Format
A data frame with 860 rows and 13 variables.
Details
RetentionTime
ProteinName
PeptideSequence
Charge
Channel
Condition
BioReplicate
Run
Mixture
TechRepMixture
Fraction
Intensity
Reference
Examples
1
huang704/MSstatsTMT documentation built on Jan. 1, 2021, 3:21 a.m.
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Description Usage Format Details Examples
Description
Example of MSstatsTMT PSM sheet from MaxQuant. It is the input for OpenMStoMSstatsTMTFormat function. It includes peak intensities for 10 proteins among 27 MS runs from three TMT10 mixtures. The important variables are as follows:
Usage
1 |
Format
A data frame with 860 rows and 13 variables.
Details
RetentionTime
ProteinName
PeptideSequence
Charge
Channel
Condition
BioReplicate
Run
Mixture
TechRepMixture
Fraction
Intensity
Reference
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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