preprocessFasta: Wrapper of the preprocessSemiRedundant()-function

In hiddengenome/altum: deepG

Description

Is called on the genomic contents of one FASTA file. Multiple entries are combined with newline characters.

Usage

preprocessFasta(
  path,
  maxlen = 250,
  vocabulary = c("l", "p", "a", "c", "g", "t"),
  verbose = F
)

Arguments

path	path to the FASTA file
maxlen	length of the semi-redundant sequences
vocabulary	char contains the vocabulary from the input char If no vocabulary exists, it is generated from the input char
verbose	TRUE/FALSE

hiddengenome/altum documentation built on April 22, 2020, 9:33 p.m.