aracne_network: Re-format ARACNe Network.
In hd2326/pageRank: Temporal and Multiplex PageRank for Gene Regulatory Network Analysis
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/aracne_network.R
Description
Re-format ARACNe network in regulon object to data.frame with regulator,
target and direction columns.
Usage
1
aracne_network(regulon)
Arguments
regulon
(regulon) ARACNe network.
Value
(data.frame) Network, with "reg", "target" and "direction" in column
name. For direction, 1/0 denotes positive/negative regulation.
Author(s)
DING, HONGXU (hd2326@columbia.edu)
Examples
1
2
3
library(bcellViper)
data(bcellViper)
aracne_network(regulon[1:10])
hd2326/pageRank documentation built on Dec. 18, 2020, 8:44 a.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/aracne_network.R
Description
Re-format ARACNe network in regulon object to data.frame with regulator, target and direction columns.
Usage
1 | aracne_network(regulon)
|
Arguments
regulon |
(regulon) ARACNe network. |
Value
(data.frame) Network, with "reg", "target" and "direction" in column name. For direction, 1/0 denotes positive/negative regulation.
Author(s)
DING, HONGXU (hd2326@columbia.edu)
Examples
1 2 3 | library(bcellViper)
data(bcellViper)
aracne_network(regulon[1:10])
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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