add_pcid: Add PCID to drug data frame
In girke-lab/signatureSearch: Environment for Gene Expression Searching Combined with Functional Enrichment Analysis
add_pcid R Documentation
Add PCID to drug data frame
Description
This function can be used to add the PCIDss (PubChem CID column added
from signatureSearch package) column to a data frame that have a column
store compound names. The compound name to PubChem CID annotation is obtained
from lincs_pert_info in 2017.
Usage
add_pcid(df, drug_col = "pert")
Arguments
df
data frame or tibble object
drug_col
name of the column that store compound names in df
Value
tibble object with an added PCIDss column
Examples
data("lincs_pert_info")
# gess_tb2 <- add_pcid(gess_tb)
girke-lab/signatureSearch documentation built on Feb. 21, 2024, 8:32 a.m.
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| add_pcid | R Documentation |
Add PCID to drug data frame
Description
This function can be used to add the PCIDss (PubChem CID column added
from signatureSearch package) column to a data frame that have a column
store compound names. The compound name to PubChem CID annotation is obtained
from lincs_pert_info in 2017.
Usage
add_pcid(df, drug_col = "pert")
Arguments
df |
data frame or tibble object |
drug_col |
name of the column that store compound names in df |
Value
tibble object with an added PCIDss column
Examples
data("lincs_pert_info")
# gess_tb2 <- add_pcid(gess_tb)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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