distribViz: Boxplots visualization of the Importance Index distribution...

In gaiac/TFARM: Transcription Factors Association Rules Miner

Description

For a set of candidate co-regulator transcription factors, the Importance Index distribution of each transcription factor is plotted in boxplots. The shape of every boxplot depends on: the dimension of the distribution, which is equal to the number of rules in which each transcription factor appears (the higher is such number, the larger is a boxplot), the variability of the distribution (the higher is the variability of the Importance Index distribution, the longer is a boxplot). Moreover, the higher is the median of the Importance Index distribution for a candidate co-regulator transcription factor, the higher the boxplot is aligned with respect to the y-axis.

Usage

distribViz(I, TFs)

Arguments

I	a list of Importance Index distributions (IIDs)
TFs	string vector with the names of the transcription factors

Value

A boxplot representing the transcription factor IIDs

Examples

# Load IMP_Z and p from the data_man collection of datasets:
data('data_man')

# Plot the Importance Index distributions of the transcription factors in p:
distribViz(IMP_Z,p_TFs)

gaiac/TFARM documentation built on June 24, 2019, 5:43 p.m.