dot-errorCodes: Error codes used in this package

In frankkramer-lab/RCX: R package implementing the Cytoscape Exchange (CX) format

Error codes used in this package

Description

This function returns the error message to a given (internal) error code. For some codes, additional information for the message is needed.

Usage

.errorCodes(code, info = c("<info[1]>", "<info[2]>"))

Arguments

code	character; Error code.
info	character; Additional information used in some error codes.

Value

Full text for a given error code.

Details

List of error codes:

e404

THIS ERROR SHOULD NEVER HAPPEN!!!

ErrorCodeNotFound

##############################
## !!ERROR CODE NOT FOUND!! ##
##############################
requested error code: 
<info[1]>

graphNELEdgesRequired

RCX object requires edges to be converted to an graphNEL object!

idNonNeg

Provided IDs (<info[1]>) must be non-neagtive!

idNotNum

Provided IDs (<info[1]>) must be numeric!

idRefNotFound

Provided IDs of <info[1]> don't exist in <info[2]>

idRefNotPresent

<info[1]> not present as <info[2]>

igraphEdgesRequired

RCX object requires edges to be converted to an igraph object!

paramAllNull

At least one argument of <info[1]> must be set!

paramDifferentLength

Arguments must have the same length!
  <info[1]>

paramListAllWrongClass

Not all elements of the list <info[1]> are of class "<info[2]>"!

paramMissing

Missing arguments: <info[1]>

paramMissingRCX

RCX object is missing!

paramNa

Argument <info[1]> must not contain any NA values!

paramNonNeg

All elements of <info[1]> must be non-neagtive!

paramNotChar

All elements of <info[1]> must be characters!

paramNotList

Argument <info[1]> must be a list!

paramNotLog

All elements of <info[1]> must be logical!

paramNotNamed

Object <info[1]> must have names!

paramNotNum

All elements of <info[1]> must be numeric!

paramNotUnique

Elements of <info[1]> must not contain duplicates!

paramWrongValue

Argument <info[1]> only can take following values: <info[2]>

validationFail

Aspect (<info[1]>) failed validation!
Check if the aspect is valid: validate(<info[1]>)

wrongClass

Class of object <info[1]> is not "<info[2]>"!

wrongClassOf

Class of object <info[1]> is not one of <info[2]>!

Note

Internal function only for convenience

frankkramer-lab/RCX documentation built on Feb. 4, 2023, 5:12 p.m.