fmicompbio/monaLisa: Binned Motif Enrichment Analysis and Visualization

Useful functions to work with sequence motifs in the analysis of genomics data. These include methods to annotate genomic regions or sequences with predicted motif hits and to identify motifs that drive observed changes in accessibility or expression. Functions to produce informative visualizations of the obtained results are also provided.

Getting started

Package details

Bioconductor views Epigenetics FeatureExtraction MotifAnnotation Visualization
Maintainer
LicenseGPL (>= 3)
Version1.13.1
URL https://github.com/fmicompbio/monaLisa https://bioconductor.org/packages/monaLisa/ https://fmicompbio.github.io/monaLisa/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("fmicompbio/monaLisa")
fmicompbio/monaLisa documentation built on Nov. 2, 2024, 1:33 p.m.