test_that("prepareData works", {
expect_error(.completeInitialization(transformList = 1, metrics = "m1"),
"'transformList' must be of class 'list'")
df <- data.frame(Method = rep(c("A", "B", "C"), each = 3),
Metric = rep(c("m1", "m2", "m3"), 3),
Value = runif(n = 9, min = 0, max = 3)) |>
tidyr::spread(key = Metric, value = Value)
df$m3 <- paste0("V", df$m3)
metrics <- setdiff(colnames(df), "Method")
metricInfo <- data.frame(Metric = c("m1", "m2", "m3"), num = 1:3)
idInfo <- data.frame(Method = c("A", "B", "C"), lets = letters[1:3])
set.seed(123)
pd <- .prepareData(df = df, idCol = "Method", metrics = c("m1", "m2", "m3"),
initialWeights = c(m1 = 0.1, m2 = 0.3, m3 = 0.5),
initialTransforms = list(), metricInfo = metricInfo,
metricColors = list(),
idInfo = idInfo, idColors = list(),
weightResolution = 0.05, metricCol = "Metric",
defaultWeightValue = 0.2)
expect_type(pd, "list")
expect_length(pd, 9L)
expect_named(pd, c("metrics_num", "metrics_cat", "idColors",
"metricColors", "initialTransforms",
"metricsWithWeights", "initialWeights",
"idInfo", "metricInfo"))
expect_equal(pd$metrics_num, c("m1", "m2"))
expect_equal(pd$metrics_cat, c("m3"))
expect_type(pd$idColors, "list")
expect_equal(pd$idColors$lets, c(a = "lightgoldenrodyellow",
b = "mediumorchid1", c = "gray26"))
expect_equal(pd$idColors$Method, c(A = "#F8766D", B = "#00BA38", C = "#619CFF"))
expect_type(pd$metricColors, "list")
expect_named(pd$metricColors, c("num", "Metric"))
expect_type(pd$metricColors$num, "closure")
expect_equal(pd$metricColors$Metric, c(m1 = "#F8766D", m2 = "#00BA38", m3 = "#619CFF"))
expect_type(pd$initialTransforms, "list")
expect_length(pd$initialTransforms, 2)
expect_named(pd$initialTransforms, c("m1", "m2"))
expect_type(pd$initialTransforms$m1, "list")
expect_equal(pd$initialTransforms$m1, pd$initialTransforms$m2)
expect_type(pd$initialTransforms$m1, "list")
expect_length(pd$initialTransforms$m1, 4)
expect_named(pd$initialTransforms$m1, c("offset", "flip", "cuts", "transform"))
expect_true(is.character(pd$metricsWithWeights))
expect_equal(pd$metricsWithWeights, c("m1", "m2", "m3", "Metric_m1",
"Metric_m2", "Metric_m3",
"num_1", "num_2", "num_3"))
expect_equal(pd$initialWeights, c(m1 = 0.1, m2 = 0.3, m3 = 0.5,
Metric_m1 = 0.2, Metric_m2 = 0.2,
Metric_m3 = 0.2, num_1 = 0.2,
num_2 = 0.2, num_3 = 0.2))
expect_equal(pd$idInfo, idInfo)
expect_equal(pd$metricInfo, metricInfo)
set.seed(345)
pd <- .prepareData(df = df, idCol = "Method", metrics = c("m1", "m2", "m3"),
initialWeights = NULL,
initialTransforms = list(m1 = list(offset = 4),
m2 = list(flip = TRUE)),
metricInfo = metricInfo[, 1, drop = FALSE],
metricColors = list(),
idInfo = idInfo,
idColors = list(Method = c(A = "blue", B = "green", C = "yellow")),
weightResolution = 0.05, metricCol = "Metric",
defaultWeightValue = 0.2)
expect_type(pd, "list")
expect_length(pd, 9L)
expect_named(pd, c("metrics_num", "metrics_cat", "idColors",
"metricColors", "initialTransforms",
"metricsWithWeights", "initialWeights",
"idInfo", "metricInfo"))
expect_equal(pd$metrics_num, c("m1", "m2"))
expect_equal(pd$metrics_cat, c("m3"))
expect_type(pd$idColors, "list")
expect_equal(pd$idColors$lets, c(a = "slategray", b = "lightskyblue4", c = "grey79"))
expect_equal(pd$idColors$Method, c(A = "blue", B = "green", C = "yellow"))
expect_type(pd$metricColors, "list")
expect_named(pd$metricColors, c("Metric"))
expect_equal(pd$metricColors$Metric, c(m1 = "#F8766D", m2 = "#00BA38", m3 = "#619CFF"))
expect_type(pd$initialTransforms, "list")
expect_length(pd$initialTransforms, 2)
expect_named(pd$initialTransforms, c("m1", "m2"))
expect_type(pd$initialTransforms$m1, "list")
expect_equal(pd$initialTransforms$m1$offset, 4)
expect_equal(pd$initialTransforms$m1$flip, FALSE)
expect_equal(pd$initialTransforms$m2$offset, 0)
expect_equal(pd$initialTransforms$m2$flip, TRUE)
expect_type(pd$initialTransforms$m1, "list")
expect_length(pd$initialTransforms$m1, 4)
expect_named(pd$initialTransforms$m1, c("offset", "flip", "cuts", "transform"))
expect_true(is.character(pd$metricsWithWeights))
expect_equal(pd$metricsWithWeights, c("m1", "m2", "m3"))
expect_equal(pd$initialWeights, c(m1 = 0.2, m2 = 0.2, m3 = 0.2))
expect_equal(pd$idInfo, idInfo)
expect_null(pd$metricInfo)
set.seed(678)
pd <- .prepareData(df = df, idCol = "Method", metrics = c("m1", "m2", "m3"),
initialWeights = NULL,
initialTransforms = list(m1 = list(offset = 4),
m2 = list(flip = TRUE)),
metricInfo = metricInfo[, 1, drop = FALSE],
metricColors = list(),
idInfo = idInfo[, 1, drop = FALSE],
idColors = list(Method = c(A = "blue", B = "green", C = "yellow")),
weightResolution = 0.05, metricCol = "Metric",
defaultWeightValue = 0.2)
expect_type(pd, "list")
expect_length(pd, 9L)
expect_named(pd, c("metrics_num", "metrics_cat", "idColors",
"metricColors", "initialTransforms",
"metricsWithWeights", "initialWeights",
"idInfo", "metricInfo"))
expect_equal(pd$metrics_num, c("m1", "m2"))
expect_equal(pd$metrics_cat, c("m3"))
expect_type(pd$idColors, "list")
expect_equal(pd$idColors$Method, c(A = "blue", B = "green", C = "yellow"))
expect_type(pd$metricColors, "list")
expect_named(pd$metricColors, c("Metric"))
expect_equal(pd$metricColors$Metric, c(m1 = "#F8766D", m2 = "#00BA38", m3 = "#619CFF"))
expect_type(pd$initialTransforms, "list")
expect_length(pd$initialTransforms, 2)
expect_named(pd$initialTransforms, c("m1", "m2"))
expect_type(pd$initialTransforms$m1, "list")
expect_equal(pd$initialTransforms$m1$offset, 4)
expect_equal(pd$initialTransforms$m1$flip, FALSE)
expect_equal(pd$initialTransforms$m2$offset, 0)
expect_equal(pd$initialTransforms$m2$flip, TRUE)
expect_type(pd$initialTransforms$m1, "list")
expect_length(pd$initialTransforms$m1, 4)
expect_named(pd$initialTransforms$m1, c("offset", "flip", "cuts", "transform"))
expect_true(is.character(pd$metricsWithWeights))
expect_equal(pd$metricsWithWeights, c("m1", "m2", "m3"))
expect_equal(pd$initialWeights, c(m1 = 0.2, m2 = 0.2, m3 = 0.2))
expect_null(pd$idInfo)
expect_null(pd$metricInfo)
})
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