test_that("ParCoordPlot works", {
scoredata <- data.frame(
Method = paste0("M", seq_len(8)),
Score = c(5.86, 5.71, 4.86, 4.71, 4.57, 4.29, 3.57, 2.43),
Type = c("T1", "T1", "T2", "T1", "T2", "T1", "T2", "T3")
)
plotdata <- data.frame(
Method = rep(paste0("M", seq_len(8)), 3),
Metric = rep(paste0("S", seq_len(3)), each = 8),
Group = rep(c("A", "A", "B"), each = 8),
NumCol = rep(c(1, 1, 2), each = 8),
ScaledValue = c(7, 8, 6, 5, 4, 3, 2, 1, 8, 7, 5, 4, 6, 1, 3, 2, 8, 7, 3, 5, 2, 4, 6, 1),
Weight = 0.2
)
metricInfo <- data.frame(Metric = paste0("S", seq_len(3)),
Group = c("A", "A", "B"),
NumCol = 1:3)
idInfo <- scoredata[, c("Method", "Type")]
bpp <- makeParCoordPlot(
bettrList = NULL,
plotdata = plotdata, idCol = "Method",
metricCol = "Metric", valueCol = "ScaledValue",
metricGroupCol = "metricGroup",
metricColors = list(Metric = c("blue", "red", "green")),
idColors = list(Method = .gg_color_hue(8)),
methods = unique(scoredata$Method),
metricGrouping = "---", highlightMethod = "---", labelSize = 10
)
bpp
expect_s3_class(bpp, "ggplot")
bpp <- makeParCoordPlot(
bettrList = NULL,
plotdata = plotdata, idCol = "Method",
metricCol = "Metric", valueCol = "ScaledValue",
metricGroupCol = "metricGroup",
metricColors = list(Metric = c("blue", "red", "green")),
idColors = list(Method = .gg_color_hue(8)),
methods = NULL,
metricGrouping = "---", highlightMethod = "---", labelSize = 10
)
bpp
expect_s3_class(bpp, "ggplot")
## With bettrList instead
bpp2 <- makeParCoordPlot(
bettrList = list(
plotdata = plotdata, idCol = "Method",
metricCol = "Metric", valueCol = "ScaledValue",
metricGroupCol = "metricGroup",
metricColors = list(Metric = c("blue", "red", "green")),
idColors = list(Method = .gg_color_hue(8)),
methods = unique(scoredata$Method),
metricGrouping = "---"), highlightMethod = "---", labelSize = 10
)
bpp2
expect_s3_class(bpp2, "ggplot")
plotdata$metricGroup <- plotdata$Group
bpp <- makeParCoordPlot(
bettrList = NULL,
plotdata = plotdata, idCol = "Method",
metricCol = "Metric", valueCol = "ScaledValue",
metricGroupCol = "metricGroup",
metricColors = list(Group = c("blue", "red")),
idColors = list(Method = .gg_color_hue(8)),
methods = unique(scoredata$Method),
metricGrouping = "Group", highlightMethod = "---", labelSize = 10
)
bpp
expect_s3_class(bpp, "ggplot")
plotdata$metricGroup <- plotdata$NumCol
bpp <- makeParCoordPlot(
bettrList = NULL,
plotdata = plotdata, idCol = "Method",
metricCol = "Metric", valueCol = "ScaledValue",
metricGroupCol = "metricGroup",
metricColors = list(NumCol = circlize::colorRamp2(c(1, 2), c("white", "blue"))),
idColors = list(Method = .gg_color_hue(8)),
methods = unique(scoredata$Method),
metricGrouping = "NumCol", highlightMethod = "---", labelSize = 10
)
bpp
expect_s3_class(bpp, "ggplot")
bpp <- makeParCoordPlot(
bettrList = NULL,
plotdata = plotdata, idCol = "Method",
metricCol = "Metric", valueCol = "ScaledValue",
metricGroupCol = "metricGroup",
metricColors = list(Metric = c("blue", "red", "green")),
idColors = list(Method = .gg_color_hue(8)),
methods = unique(scoredata$Method),
metricGrouping = "---", highlightMethod = "M1", labelSize = 10
)
bpp
expect_s3_class(bpp, "ggplot")
})
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