fa.plot: Functional association plot

In fchen365/surf: Statistical Utility for RBP (RNA binding protein) Functions

Description

This function provides a ggplot implementation for functional association (FA) plot.

Usage

fa.plot(
  object,
  plot.event = "all",
  trim = metadata(object)$trim,
  fdr.cutoff = 0.05
)

Arguments

object	a surf object from faseq or faseqFit or faseqInfer.
plot.event	character vector, event type wanted. In particular, "all" means all event types.
trim	numeric, trimming quantile. The head and tail trim/2 portion of the signal will be trimmed/ignored.
fdr.cutoff	numeric, threshold for adjusted p-value in functional association test.

Value

a ggplot object.

fchen365/surf documentation built on June 18, 2021, 12:02 p.m.