k_means_elbow: Draw an elbow plot for k-cluster selection

In espors/idepGolem: Integrated Differential Expression and Pathway Analysis

Draw an elbow plot for k-cluster selection

Description

This function takes in the processed heatmap data and creates an elbow plot to guide the selection of the number of clusters to create

Usage

k_means_elbow(heatmap_data)

Arguments

heatmap_data

Matrix of processed heatmap data from process_heatmap_data()

Value

ggplot2 object of formatted elbow plot

See Also

Other plots: PCA_plot(), chr_counts_ggplot(), chr_normalized_ggplot(), cor_plot(), draw_sample_tree(), eda_boxplot(), eda_density(), eda_scatter(), gene_counts_ggplot(), individual_plots(), mean_sd_plot(), rRNA_counts_ggplot(), sd_density(), t_SNE_plot(), total_counts_ggplot()

Other clustering functions: cluster_heat_click_info(), draw_sample_tree(), heat_sub(), heatmap_main(), process_heatmap_data(), sd_density(), sub_heat_ann()

espors/idepGolem documentation built on Oct. 27, 2024, 4:56 a.m.