gc_correct: Perform GC-correction for IFS scores
In epifluidlab/cragr: R package for CRAG

gc_correct

R Documentation

Perform GC-correction for IFS scores

Perform GC-correction for IFS scores

gc_correct(
  ifs,
  span = 0.75,
  max_training_dataset = 1000000L,
  method = "standard",
  return_model = FALSE,
  ...
)

`span`	`span` used in LOESS fit.
`max_training_dataset`	LOESS can be slow for a large dataset. If it contains more data points than this parameter, we will sample a subset and do the training.
`method`	If `standard`, the built-in `loess` function will be used for the calculation. If `caret`, will use `gamLOESS`