tests/testthat/test-path_enrich.R
In emiliesecherre/famat: Functional analysis of metabolic and transcriptomic data
genes=c("ACAA1","SLC6A12")
meta=c("C00002","C00719")
listk=path_enrich("KEGG",meta,genes)
resmeta=listk[[1]];resgene=listk[[2]]
test_that("pathways are found", {
#expect_equal(nrow(resmeta),7)
expect_equal(nrow(resgene),11)
})
emiliesecherre/famat documentation built on April 23, 2023, 9:15 p.m.
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genes=c("ACAA1","SLC6A12")
meta=c("C00002","C00719")
listk=path_enrich("KEGG",meta,genes)
resmeta=listk[[1]];resgene=listk[[2]]
test_that("pathways are found", {
#expect_equal(nrow(resmeta),7)
expect_equal(nrow(resgene),11)
})
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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