tidy_metadata: Tidying up of the metadata table. Samples belonging to...
In elisabettasciacca/DEGGs: Differentially Expressed Gene-Gene pairs
View source: R/DEGGs_core_functions.R
tidy_metadata R Documentation
Tidying up of the metadata table. Samples belonging to unwanted subgroups
(if specified) will be removed as well as subgroups with less than five samples,
and NAs.
Description
Tidying up of the metadata table. Samples belonging to unwanted subgroups
(if specified) will be removed as well as subgroups with less than five samples,
and NAs.
Usage
tidy_metadata(subgroups, metadata, subgroup_variable)
Arguments
subgroups
optional character vector indicating which subgroups
are used for comparison. If not specified, all subgroups in
subgroup_variable will be used.
metadata
a data frame of sample data with rownames matching the
sample IDs in normalised_counts colnames.
subgroup_variable
column name in metadata that contains the
subgroup identifier for each sample in normalised_counts.
Value
tidied and aligned metadata.
elisabettasciacca/DEGGs documentation built on April 27, 2024, 12:51 a.m.
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View source: R/DEGGs_core_functions.R
| tidy_metadata | R Documentation |
Tidying up of the metadata table. Samples belonging to unwanted subgroups (if specified) will be removed as well as subgroups with less than five samples, and NAs.
Description
Tidying up of the metadata table. Samples belonging to unwanted subgroups (if specified) will be removed as well as subgroups with less than five samples, and NAs.
Usage
tidy_metadata(subgroups, metadata, subgroup_variable)
Arguments
subgroups |
optional character vector indicating which subgroups
are used for comparison. If not specified, all subgroups in
|
metadata |
a data frame of sample data with rownames matching the
sample IDs in |
subgroup_variable |
column name in |
Value
tidied and aligned metadata.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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