grep_clust-ClusterSet-method: Search gene module using a regular expression.
In dputhier/scigenex: The scigenex package (Single-Cell Informative GENe Explorer)
grep_clust,ClusterSet-method R Documentation
Search gene module using a regular expression.
Description
Search gene module using a regular expression.
Usage
## S4 method for signature 'ClusterSet'
grep_clust(object = NULL, reg_exp = NULL, as_list = FALSE)
Arguments
object
a ClusterSet object.
reg_exp
The regular expression indicating the genes to be found.
as_list
Whether to return the result as a list.
Examples
# load a dataset
load_example_dataset('7871581/files/pbmc3k_medium_clusters')
hit <- grep_clust(pbmc3k_medium_clusters, reg_exp="^T.*[0-9]$")
dputhier/scigenex documentation built on Feb. 28, 2025, 1:24 a.m.
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| grep_clust,ClusterSet-method | R Documentation |
Search gene module using a regular expression.
Description
Search gene module using a regular expression.
Usage
## S4 method for signature 'ClusterSet'
grep_clust(object = NULL, reg_exp = NULL, as_list = FALSE)
Arguments
object |
a ClusterSet object. |
reg_exp |
The regular expression indicating the genes to be found. |
as_list |
Whether to return the result as a list. |
Examples
# load a dataset
load_example_dataset('7871581/files/pbmc3k_medium_clusters')
hit <- grep_clust(pbmc3k_medium_clusters, reg_exp="^T.*[0-9]$")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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