README.md

In davidcoffey/LymphoSeqDB: LymphoSeq annotation databases

LymphoSeqDB

This package provides annotation databases that support the package LymphoSeq.

Installation instructions

Install release version 0.99.2

Install from Bioconductor

source("https://bioconductor.org/biocLite.R")
biocLite("LymphoSeq")

Install developer version 0.99.3

Option 1: Install from Bioconductor developer branch

# Switch to Bioconductor developer branch (requires latest version of R)
library(BiocInstaller)
useDevel()

# Download developer release
source("https://bioconductor.org/biocLite.R")
biocLite("LymphoSeq")

# Switch back to Bioconductor release branch
library(BiocInstaller)
useDevel()

Option 2: Install from GitHub

# Install the latest version of Bioconductor
source("https://bioconductor.org/biocLite.R")
biocLite()

# Download developer tools
install.packages("devtools")

# Download package from GitHub
devtools::install_github("davidcoffey/LymphoSeqDB")
devtools::install_github("davidcoffey/LymphoSeq")

Documentation

• LymphoSeq vignette
• LymphoSeqDB manual
• LymphoSeq news

davidcoffey/LymphoSeqDB documentation built on May 14, 2019, 11:09 p.m.