setNodeShapeMapping: Set Node Shape Mapping

In cytoscape/RCy3: Functions to Access and Control Cytoscape

Set Node Shape Mapping

Description

Map table column values to shapes to set the node shape.

Usage

setNodeShapeMapping(
  table.column,
  table.column.values = NULL,
  shapes = NULL,
  default.shape = NULL,
  style.name = NULL,
  network = NULL,
  base.url = .defaultBaseUrl
)

Arguments

table.column	Name of Cytoscape table column to map values from
table.column.values	List of values from Cytoscape table to be used in mapping. Leave NULL to perform an automatic mapping to all column values.
shapes	List of shapes to map to table.column.values. Leave NULL to perform an automatic mapping to available shapes. See getNodeShapes
default.shape	Shape to set as default. See getNodeShapes
style.name	Name of style; default is "default" style
network	(optional) Name or SUID of the network. Default is the "current" network active in Cytoscape.
base.url	(optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3.

Value

None

Examples

setNodeShapeMapping('type')
setNodeShapeMapping('type',c('protein','dna'),c('ELLIPSE','RECTANGLE'))

cytoscape/RCy3 documentation built on Nov. 1, 2024, 2:49 a.m.