testNCBI.R
In croesel/Trans2Kegg: Annotate transcripts and predicted protein sequences
#!/usr/bin/env Rscript
# testNCBI.R
library(tidyr)
library(RCurl)
library(XML)
library(Biostrings)
library(utils)
library(KEGGREST)
library(annotate)
source("getKegg.R")
source("annotateNCBI.R")
filepath <- system.file("extdata", "aiptasia.fa", package="Trans2Kegg")
annotateNCBI(c("KXJ29331.1"), filepath,"annot.csv")
croesel/Trans2Kegg documentation built on May 12, 2019, 3:11 p.m.
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#!/usr/bin/env Rscript
# testNCBI.R
library(tidyr)
library(RCurl)
library(XML)
library(Biostrings)
library(utils)
library(KEGGREST)
library(annotate)
source("getKegg.R")
source("annotateNCBI.R")
filepath <- system.file("extdata", "aiptasia.fa", package="Trans2Kegg")
annotateNCBI(c("KXJ29331.1"), filepath,"annot.csv")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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