cssp.sim-methods: Simulate bin binding intensities according to the posterior...

In chandlerzuo/cssp: ChIP-Seq Statistical Power

Description

Simulate bin binding intensities according to the posterior distributions of the fitted CSSP model.

Usage

cssp.sim(fit, x = fit@lambday)

## S4 method for signature 'CSSPFit'
cssp.sim(fit, x = fit@lambday)

Arguments

fit	A CSSPFit-class class object describing the CSSP model.
x	A numeric value for the sequencing depth of the ChIP sample at which the new binding intensities at simulated.

Value

A list object containing

chip	A numeric vector for the binding intensities for the ChIP sample.
bind	A numeric vector for the simulated binding regions.
bind.sig	A numeric vector for the signal component for each bin.

Author(s)

Chandler Zuo [e-mail]

Examples

data( sampleFit )
cssp.sim( fit = sampleFit, x = sampleFit@lambday*0.1 )

chandlerzuo/cssp documentation built on May 13, 2019, 3:23 p.m.