HMAnalysedPerturbationData-class: Data wrapper for analysed perturbation data using a...
In cbg-ethz/knockdown: Statistical Analysis of High-Throughput Genetic Perturbation Screens
Description
Class HMAnalysedPerturbationData is a wrapper for
various objects of an analysis of a perturbation experiment done
using a hierarchical model. Class HMAnalysedPerturbationData exposes
getters for its members of the same name, but no setters, because the data
should be treated as
constant once set. Objects of class HMAnalysedPerturbationData
do not need to be
constructed manually but are returned from calling hm (see
the examples).
Slots
nestedGeneEffectsthe estimated effect sizes for genes on a
viral level
modelFitthe fitted model
Examples
1
2
3
data(rnaiscreen)
res <- hm(rnaiscreen)
class(res)
cbg-ethz/knockdown documentation built on Feb. 11, 2020, 6:25 p.m.
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Description
Class HMAnalysedPerturbationData is a wrapper for
various objects of an analysis of a perturbation experiment done
using a hierarchical model. Class HMAnalysedPerturbationData exposes
getters for its members of the same name, but no setters, because the data
should be treated as
constant once set. Objects of class HMAnalysedPerturbationData
do not need to be
constructed manually but are returned from calling hm (see
the examples).
Slots
nestedGeneEffectsthe estimated effect sizes for genes on a viral level
modelFitthe fitted model
Examples
1 2 3 | data(rnaiscreen)
res <- hm(rnaiscreen)
class(res)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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