umap: Retrieve umap list from a musica_result object
In campbio/musicatk: Mutational Signature Comprehensive Analysis Toolkit
umap R Documentation
Retrieve umap list from a musica_result object
Description
The signature matrix contains the probability of
mutation motif in each sample. Rows correspond to each motif and
columns correspond to each signature.
Usage
umap(result)
## S4 method for signature 'musica_result'
umap(result)
umap(result) <- value
## S4 replacement method for signature 'musica_result,matrix'
umap(result) <- value
Arguments
result
A musica_result object generated by
a mutational discovery or prediction tool.
value
A list of umap dataframes
Value
A list of umap dataframes
Examples
data(res)
umap(res)
data(res)
umap(res) <- matrix()
campbio/musicatk documentation built on July 14, 2024, 8:28 a.m.
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| umap | R Documentation |
Retrieve umap list from a musica_result object
Description
The signature matrix contains the probability of
mutation motif in each sample. Rows correspond to each motif and
columns correspond to each signature.
Usage
umap(result)
## S4 method for signature 'musica_result'
umap(result)
umap(result) <- value
## S4 replacement method for signature 'musica_result,matrix'
umap(result) <- value
Arguments
result |
A |
value |
A list of umap dataframes |
Value
A list of umap dataframes
Examples
data(res)
umap(res)
data(res)
umap(res) <- matrix()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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