tables: Retrieve the list of count_tables from a musica object

In campbio/musicatk: Mutational Signature Comprehensive Analysis Toolkit

Retrieve the list of count_tables from a musica object

Description

The count_tables contains standard and/or custom count tables created from variants

Usage

tables(object)

## S4 method for signature 'musica'
tables(object)

tables(musica) <- value

## S4 replacement method for signature 'musica,list'
tables(musica) <- value

Arguments

object	A musica object generated by the create_musica_from_variants or create_musica_from_counts function.
musica	A musica object generated by the create_musica_from_variants or create_musica_from_counts function.
value	A list of count_table objects representing counts of motifs in samples

Value

A list of count_tables

Examples

data(res)
tables(res)

campbio/musicatk documentation built on Dec. 25, 2024, 9:34 p.m.