subset_variant_by_type: Subsets a variant table based on Variant Type
In campbio/musicatk: Mutational Signature Comprehensive Analysis Toolkit
View source: R/annotate_variants.R
subset_variant_by_type R Documentation
Subsets a variant table based on Variant Type
Description
Subsets a variant table based on Variant Type
Usage
subset_variant_by_type(tab, type)
Arguments
tab
Input variant table
type
Variant type to return e.g. "SBS", "INS", "DEL", "DBS"
Value
Returns the input variant table subsetted to only contain variants
of the specified variant type
Examples
data(musica)
annotate_variant_type(musica)
subset_variant_by_type(variants(musica), "SBS")
campbio/musicatk documentation built on July 14, 2024, 8:28 a.m.
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View source: R/annotate_variants.R
| subset_variant_by_type | R Documentation |
Subsets a variant table based on Variant Type
Description
Subsets a variant table based on Variant Type
Usage
subset_variant_by_type(tab, type)
Arguments
tab |
Input variant table |
type |
Variant type to return e.g. "SBS", "INS", "DEL", "DBS" |
Value
Returns the input variant table subsetted to only contain variants of the specified variant type
Examples
data(musica)
annotate_variant_type(musica)
subset_variant_by_type(variants(musica), "SBS")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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