name_signatures: Rename signatures for a model

In campbio/musicatk: Mutational Signature Comprehensive Analysis Toolkit

Rename signatures for a model

Description

Rename signatures for a model

Usage

name_signatures(
  musica,
  model_id,
  name_vector,
  modality = "SBS96",
  result_name = "result"
)

Arguments

musica	A musica object containing a mutational signature discovery or prediction.
model_id	The name of the model to rename signatures for.
name_vector	Vector of user-defined signature names
modality	The modality of the model. Must be "SBS96", "DBS78", or "IND83". Default "SBS96".
result_name	Name of the result list entry containing the model. Default "result".

Value

Musica object with user-defined signatures names

Examples

data(res)
name_signatures(res,
  model_id = "res",
  name_vector = c("smoking", "apobec", "unknown")
)

campbio/musicatk documentation built on Dec. 25, 2024, 9:34 p.m.