subset_variants_by_samples: Return sample from bagel object
In campbio/BAGEL: Novel Mutational Signature Analysis
Description
Usage
Arguments
Value
Examples
Description
Return sample from bagel object
Usage
1
subset_variants_by_samples(bay, sample_name)
Arguments
bay
Bagel object containing samples
sample_name
Sample name to subset by
Value
Returns sample dataframe subset to a single sample
Examples
1
2
bay <- readRDS(system.file("testdata", "bagel.rds", package = "BAGEL"))
subset_variants_by_samples(bay, "public_LUAD_TCGA-97-7938.vcf")
campbio/BAGEL documentation built on Oct. 6, 2020, 3:59 a.m.
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Description Usage Arguments Value Examples
Description
Return sample from bagel object
Usage
1 | subset_variants_by_samples(bay, sample_name)
|
Arguments
bay |
Bagel object containing samples |
sample_name |
Sample name to subset by |
Value
Returns sample dataframe subset to a single sample
Examples
1 2 | bay <- readRDS(system.file("testdata", "bagel.rds", package = "BAGEL"))
subset_variants_by_samples(bay, "public_LUAD_TCGA-97-7938.vcf")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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